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178 Cards in this Set

  • Front
  • Back
levels of organization of biology (5, organism to biosphere)
organism < population < community < ecosystem < biosphere
the three universal characteristics of living organisms
1) energy transformation (life does reactions)
light, organic, inorganic compounds

2) reproduction (life propogates)
asexual (no genetic diff) and sexual (gametes)

3) shows homeostasis (life adapts to environments, etc)
evolution (what is it, how can we track it)
- genetic and resulting phenotypic change in populations of orgs from one generation to the next

- track it through fossil record, morphological comparisons, development, molecular analysis, and behaviour
why is choking common (evolutionary perspective) in humans?
LUNGFISH
- developed resp tracts from their mouths, cause it was a convenient opening to take in
origin of life on earth (what are the 2 theories)
- extraterrestrial
- chemical evolution on earth

*even extraterrestetrial life had to be built by chem evolution
miller & urey experiment
- tried to mimic early earth's atmosphere
- organic molecules formed. how?
-light/EM energy source (lightning)
there were ________ origins of life
1, cuase everything is so similar
over time, O2 has gone ______ (up/down) in earth
up. there was no O2 originally, it was waste product when CO2 was used to make organic molecules
who were the first photosynthetic organisms?
cyanobacteria
precambrian era (2 parts)
-life in oceans only
- mainly unicellular/prokaryotic

late precambrian
- eukaryortes evolved. some soft bodied animals
stromatolites
layered cyanobacterial concretions
ediacaran animals
soft bodied animals bo
cambrian explosion
beggining of paleozoic era. rapid diversification of life
what is and why did ordivician end?
- first part of paleozoic era, radiation of marine life
- ended cause of sea level and ocean temp drop.
silurian
- mid paleozoic
- colonization of land (by plants & arthropods)
- swimming, jawless fishes
devonian
- age of fishes
- first seed plants on land
- spiders and insects
carboniferous
- age of amphibians/coal
- land was dominated by swamp forses (ferns and horse trails)
- flight (in insects)
- amniotic egg evolves (shelled egg)
how did organisms begin to reproduce on land?
the amniotic egg
permian
-reptiles diversify
- largest mass extinction in history at the end (cause pangea formed)
-end of paleozoic
mesozoic (3 types)
- triassic (first dinsaurs, mammals)
- jurassic (large dinosaurs, flying reptiles, flowering plants)
- cretaceous (mammals radiate)
cretaceous mass extinction
- caused by meteorite
- all large animals died
how many mass extincts in earth? what are they linked with?
drops in sea level,
cenozoic
- mammals and birds take off
-teritiary era
- quartinary era (humans)
plants living in water (energy, reprod, support, growth)
- ENERGY: stay hydrated,
- REPROD: large number of gametes, released into water
- SUPPORT: water provides support for physical structure
- SIZE: photosynthesis and size is limited
plants living on land (energy, reprod, support, growth)
- ENERGY: need organs for absorbing water and minerals (roots)
- water conservation through stomata
- water transported through xylem and phloem
REPROD: gametes are protected, and seed habit (resists dehydration)
SUPPORT: cell wall thickening
SIZE: larger cause of diploid genome
order of adaptations for plants to flourish on land (9)
1) protected embryos
2) stomata
3) green sporophyte
4) basic leaves
5) vascular elements (distribution)
6) complex leaves
7) seeds
8) naked seeded plants
9) flowering plants
gametophyte vs. sporophyte
gametophytes are haploid
vs.
sporophytes are diploid
what is alternation of generations?
when the organism goes through both gametophyte and sporophyte forms
chara
- cells found in green algae, up to 5cm long
antherida vs. archegonia
produce sperm vs. produce eggs
what are green algae?
- anscestors of plants
- have photosynth with chloro a and b,
- cellulose cell walls
- haploid dominant
isogamy vs. heterogamy
both gametes look similar
Ex: chlamydomanas

heterogamy
- gametes are different (egg and sperm)
matrotrophic
embryo is supplied by nutrition from the mother
where did stomata first appear?
in mosses
homospory vs. heterospory
homospory
- produce a single type of gametophyte with both male and female organs

heterospory
-first appeared in vascular plants
- megaspore (female) and microspore (male)
microphylls (what, example)
simple leaves or leaf like structure , one vascular projection

ex: club moss
megaphylls
large leaves with many vascular veins
xylum & pholem
transport tissues.

xylum: water, minerals
phoelm: organic compounds
gymnosperm vs. angiosperm
gymnosperm
"naked seed" plants
-sperm NOT motile
- some of the tallest trees
- conifers

angiosperm
- flowers (mature sporophytes)
- xylem vessels
- sperms are not motile
what are tracheids, vessels, seive tubes and companion cells?
higher plant vasculature
how alternation of generations has evolved
1) gametophyte large, nourishes small sporophyte (moss)

2) sporophyte much larger, gametophyte small, live independently (ferns)

3) sporophyte is predominant and nourishes hidden gametophyte (flowering plants)
dicot vs. monocot
single cotylodon vs. two cotyledons
tap root vs. fibrous root
tap root
- in eudicots, strong root system. found in trees

fibrous root
- in monocots, single and weak root system. large surface area
- ex: corn, barley
petiole vs. sheath
structres at the base of a leaf

- petioles are in eudicots

- monocots only have sheaths
phytomere
is the modular structure of a stem.

- includes: an internode
- leaf at the upper end of internode
- axillary bud (embyonic) in the axil of the leaf
reticulate vs. parallel
leaf venation.

- monocots have a parallel venation
- eudicots have a reticulate venation
cotyldons
- come up two of them in dicot plants.
primary growth vs. 2ndary root
lengthenin vs. thickening of plant

- not much 2ndary growth in monocot plants because of a lack of cambian
meristem, what is it
the part of the place that is a permenant embryonic region
- growth happens from here
apical meristem
shoot apical meristems and root apical meristem
- increases height
lateral meristem
ex: cambium
- increases diameter of plant
- indeterminate/permanent
temporary meristems
- produce organs with finite size
- ones that have leaf/flower parts
terminal bud
- top of plant, contains a shoot apical meristem
leaflets
- DONT have axillary embryonic regions (as opposed to leaves)
- are part of a compound leaf
stipules, tendrils, spines
- the part that attaches the compound leaves to the stem.

- tendrils help a plant climb as soon as it touches a new surface it grows around it
phyllotaxy
patterns of leaf arrangement.
vascular bundes in stems of monocots vs. eudicots
randomly arranges in monocots.

- arranged into a circle in periphery in eudicots
cork cambium
another type of secondary growth. it is water repellent. protects against pathgens

- can sometimes split open (a lenticel) to allow oxygen in
vascular bundes in roots of monocots vs. eudicots
- monocots have a regular arrangement

-eudicots have irregular arrangement
why are leafs flat?
to maximize photosynthesis
palisade mesophyll cell
carry out photosynthesis
root cap
- covers the root apical meristem. is constantly being eroded away
root branches vs. stem branches
from deep layers of the centre root vs. from superficial layers of the center stem
quiescent centre
-
what are modifications of stems?
- can do photosynthesis (cacti)
- potatoes are stems (each eye can make a new plant)
what are modifications of leafs?
- into pitchers, for carnivorous plants
_ completely upright in monocots
trimerous vs. pentamerous
3 sepals/petals vs. 5 sepals/petals
monocot vs. dicot
parts of stamen
filament, anther
parts of carpel
ovary, style (surrounds it), stigma (entry to ovary at top)
all flower parts are modified _______
leaves. ie. the seed chambers in fruits (carpels) are folded leaves.
diffusion
- movement of molcules due to their own internal thermal/kinetic energy
osmosis
diffusion across a selectively permeable membrane
bluk flow vs. osmosis
driven by pressure difference vs. driven by concentration
apoplastic vs. symplastic pathways
apoplastic
- never enters cells, only travels through cell walls

symplastic
- water goes through the cell
casparian strips
- the "border point" for water, needs to enter celsl at this point caus eit is entering endodermis (interior)
transpiration
- plant losing water through the stomata
tension
pulls water from the veins into the leaves
plants throw ___% of water back into the atmosphere
99
plants are ______ producers
primary
how is hydrogen put onto carbon?
water is split, H is used for gradient, energized H are added to NADP+
source tissue vs. sink tissue
leaves (collecting organs) vs. roots (growing organs)

- leaves send sugar to phloem to roots
- roots send water to xylem to leaves
what is an essential element?
- needs to play a direct role in the life-cycle of the plant
- cant be replaced by another element
- its lack/absence creates a specific deficient symptom
essential minerals (macro vs. micro)
Macro: CaKMgNPSSi

Micro: Boron, chlorine, and all transition metals
root hairs
- increase absorbtive area of roots
clay particles are ____ charged
- negatively, attract cations on surface.
- roots exchance H from carbonic acid of from plant itself to get the cations
leaching
when soil is over irrigated, it pushes anions too deep for the roots
root nodules
- batceria that "fix" nitrogen are in these nodules
- they live symbiotically withj plants
- root nodules actually attract them they releasing chemicals, then surround them. they start growing inside the plant
ectotrophic mycorrihizal fungus vs. vesicular arbuscular mychorrhizal fungus
- symbiootic fungus with plant, outside of plant vs. inside plant
why are some plants carnivorous?
- in low soil-nitrogen environments, they need to get it from animals
cuscuta
a parasitic plant that steals nutrients from other plants
growth
irreversible QUANTITATIVE increase
development
QUALITATIVE changes in body structure or function. ie organogenesis, morphogenesis, aging
phytohormones
- regulate plant growth and development and activity at very low concentrations
gibberellins
- plant hormones that promote seed germination, stem growth, fruit development etc.
growth vs. time graph
- s shape

-lag phase
-log phase
-stationary phase
trophic growth movements
- growth affected by environmental factors
-ie. light: phototrophic
if you stimulate cells on the left, the plant will grow towards the _____
right (cause the left side gets longer, and it becomes convex)
apical dominance
- mediated by auxin

- the part of the plant that have auxin has apical dominance.
shoot and root responses to gravity
- shoots grow awy from gravity, roots grow towards gravity
abscisic acid
- keeps seeds dormant
- it has to degrade or leech out before the seed will germinate
light requirement for seed germination
- if the last pigment they are exposed to is far red, then they wont grow

- if the last pigment they are exposed to is red, then they will grow
phytochrome
- a single pigment that can absorb two different wavelengths of life (through conformational change)
giberellin treatment can substitute for:
- light treatment
- chilling treatment
asexual vs. sexual reproduction in angiosperms
asexual
- potato
-each eye gives life to another potato

sexual
- flowering plants
photoperiodism (3 categories)
plants flower depending on the length of day and night

Short day plant - (have a maximum for day length)

long day plant - (have a minmum for day length)

- day neutral plants (depend on how many leaves have budded)
florigen
- a protein produced in leaves
- it signals to the plant how much time in the day is light/dark
double fertilization in angiosperms
- generative cell makes 2 sperms:

- 1 ferrtilized the egg
- 1 combined with two polar bodies to make endosperm (triploid). makes the fruit
types of environmental stresses
1) biotic stress
2) abiotic stresses
- temp, chemicals, oxidation, pressure (wind), drought,
responses to env. stress
1) avoidance/resitance (fights stress)
2) tolerance (develop stress)
3) avoid stress
pneumatophores
- when there is oxygen deficiency
- roots stick up out of the ground to get oxygen
responses to insect stress
1) inhibits its own material form being digested by insects
2) send chemical signals for the predators of insects
responses to cutting or grazing
- removes apical dominance, so more side branches come out of the bottom of the shoot.
diversity of life (3 parts)
- genetic variation
- species composition
- function (ie. biochemical pathways, photosynthesis)
species diversity
the number of species and
how many species are there around?
- 3-100 million eukaryotes

- unknown number of prokaryotes (10k identified)
___% of species are extinct
99
main factors that control diversity
- area (doubling area increase 10-25% of species)
- climate (warm, wet areas have more species)
arthropods
animals without bones. most diverse type of life
fish, birds, mammals reptiles/amph (order in terms of diversity)
fish > reptiles > birds > mammals
genetic diversity. who has the most?
prokaryotes. the measure of genetic difference (evolutary differences)
functional diversity. who has the most?
prokaryotes.
the oldest organisms on the planet
prokaryotes
major groups of prokaryotes
1) bacteria
2) archaea (closer related to eukaria than bacteria)
archea defining factors
- distinctive lipids in cell membranes
- absence of peptidoglycan in cell wall
- lipid monolayer
bacterium structure
- capsule
- cell membrane + cell wall (HAS peptidoglycan)
where do bacteria perform respiration/photosynthesis?
- the cell membrane is highly folded, done here
morphologies of bacteria (3)
-spheres=cocci
- rods = bacilli
- helical = spirilli
gram staining
gram+ : thick cell wall (darker after staining)
gram - : thin cell wall between two membranes
antibiotics are usually ineffective against gram ___ bacteria
negative
repoduction in bacteria
- asexual reproduction: binary fission (rapid)
plasmids
- genes that are easil transferred, not part of chromosones by conjugation
conjugation vs. transformation vs. transduction
genetic material.

sharing vs. finding outside stuff vs. virally transported
homeostasis in bacteria
- form endospores: strongly protect bacteria from adverse conditions

- biofilms: for example, plaque.
chemotaxis
movement to or from chemical signals
how do bacteria get around?
- flagella (thinner and more than in euk)
- glide roll, use gas inside cell
obilgate anaerobes vs. facultative anaerobes vs. aerotolerant anaerobes
cant survive with oxygen in air. use oxygen if its around. can survive with oxygen, but dont use it
roles of heterotrophic prokaryotes
- decomposers
-symbiosis with eukaryotes
-pathogens
exotoxins vs. endotoxin
secreted by proteins (very toxic, ie. botulin toxin). endotoxins (outer bacteria membrane rarely fatal, ie. salmonella)
who are bacteria classified now?
- according to DNA sequencing, used to be shape and gramstain
taxonomy
- binomial nomenclature (each species gets two part names, genus followed by species).
hierarchy of biology (7)
kingdom, phylum, class, order, family, genus, species
clade
a part of a phylogenetic tree that has a common root
sister group
- a group with the exact same root
outgroup
with only a same root far back
analogy vs. homology
analogy
- convergent evolution (bird wing and insect wing), similar function

homology
- shared ancestry (bat wing and mammal arms)
monopyletic group
has one common ancestor
derived trait
a trait shared by a group but not in their anscestor
synapomorphy
a derived trait shared by a group AND their ancestors
eukayotes and peptidoglycan
- never have it
from prokaryote to eukaryote evolutionary
- losing cell wall is crucial to allow inward folding and increase of cell suface area
endosymbiosis
- one cell swallows another but doesnt digest it

evidence:
- doubel cell membrane around mitochondria
-mitochondrial genes matcdh baterial genes
- mitochondria and chloroplasts reproduce indep. of cell
amoebas
- protists
- may have hard shell
- move with pseudopods and cytoplasmic streaming
-unicellular
- some are pathogenic
slime moldes
- form large aggregates
-reproduce with fruiting bodies (simialr to spores)
common anscestor of plasts had a single endosymbiosis eve
- uptake of cyanobacterium
-
glaucophytes
a type of chlorophyll having eukaryote that has some peptidoglycan
green algae (clorophytes)
- unicellular and colonial
-live anywhere
-large diversity
red algae
- multicellular
- marine
-have agar
- have accessory pigments
-look like corals
excavates
- eukaryotes that lost miochondria (evolutionary reversal)
- unicellular
- have flagella
- symbionts (need other lfie to live). ie. live in termite stomachs, help digest wood

DIPLOS AND PARABS
alveolates (what is, and 3 types)
- cellulose in cell walls
- ciliates
-apicomplexans
-dinofalleglates
-apicomplexans
- unicellular, non-functional chloroplasts, need hosts
-ex: plasmodium. infects red blood cells.
ciliates
are in here (have cilia, unicellular aquaic)
ex: paramecium
dinoflagellates
- have two flagella
- marine primpary production
- can cause red tides
- release neurotixins that shellfish eat
rizaria (what is, two types)
- have long, thin psuedopods

- foraminarians
- radiolarians
- foraminarians
- marine
- form web like pseudopods
- secrete calcium carbide (made limestone in oceans)
radiolarians
- marine zooplankton
- thin, stuff pseudopods
stramenophiles
- two unequal flagella, 1 has hairs

- brown algae
brown algae
, multicellular, large
- form kelp forests
-attach to rocks with glue
diatomes
- unicellular
- source of diacomaceuous eath (toothpaste, metal polish, pools)
oomycetes
- caused the potato famine
- decomposers
- water molds and downy mildews
- unicellular (filamentous)
fungi are (6)
absorptive heterotrophs
- DECOMPOSERS (SAPROBES)
- CELL WALL OF CHITIN
- MULTICELLULAR
-
hyphae (what is it), 2 types
long branches of fungi filaments. mycelium are a tangled mass of hyphae.

septae (cross walls)
coenocyctic (no cross walls)
septate
cross-wall
mushrooms (fruiting bodies) produce spores by ________
formed for sexual reproduction meosis
mycorrihiza (how it benefits plants and fungi)
- plants: get water an minerals
fungi: get carbs
lcihens
fungus + cyanobacterium (or unicell. green algae)

- they are pioneer species, can indicate air pollution
phylogeny of fungi
Flourished during Permian
Closely related to animals
– domain of botanists for >100 years
~70,000 species known
key principles of exp design
1. Developing a hypothesis
2. Designing an experiment with controls
3. Designing an experiment with replication
4. Randomizing treatments
macronuclei vs. micronuclei in paramecium
micro controls sex. macro control functions